STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716715_00870Unannotated protein. (104 aa)    
Predicted Functional Partners:
GCA_000716715_00869
Unannotated protein.
       0.778
GCA_000716715_00868
Unannotated protein.
       0.773
GCA_000716715_00871
Unannotated protein.
       0.671
GCA_000716715_08167
Unannotated protein.
  
     0.469
GCA_000716715_06769
Unannotated protein.
  
     0.463
GCA_000716715_00872
Unannotated protein.
       0.435
Your Current Organism:
Dactylosporangium aurantiacum
NCBI taxonomy Id: 35754
Other names: ATCC 23491, D. aurantiacum, DSM 43157, IFO 12592, JCM 3083, NBRC 12592, NRRL B-8018, NRRL B-8111, VKM Ac-654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.