STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716715_01344Unannotated protein. (396 aa)    
Predicted Functional Partners:
GCA_000716715_00416
Unannotated protein.
  
  
 0.980
GCA_000716715_01345
Unannotated protein.
       0.894
GCA_000716715_01448
Unannotated protein.
 
  
 0.833
GCA_000716715_01407
Unannotated protein.
 
  
 0.822
GCA_000716715_01342
Unannotated protein.
 
    0.780
GCA_000716715_01343
Unannotated protein.
 
     0.774
GCA_000716715_00420
Unannotated protein.
     
 0.709
GCA_000716715_00395
Unannotated protein.
  
  
 0.706
GCA_000716715_01340
Unannotated protein.
 
  
 0.677
GCA_000716715_01341
Unannotated protein.
  
    0.651
Your Current Organism:
Dactylosporangium aurantiacum
NCBI taxonomy Id: 35754
Other names: ATCC 23491, D. aurantiacum, DSM 43157, IFO 12592, JCM 3083, NBRC 12592, NRRL B-8018, NRRL B-8111, VKM Ac-654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.