STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716715_04754Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_000716715_00123
Unannotated protein.
  
  0.855
GCA_000716715_03420
Unannotated protein.
  
  0.855
GCA_000716715_07017
Unannotated protein.
  
  0.855
GCA_000716715_02585
Unannotated protein.
  
  0.853
GCA_000716715_06178
Unannotated protein.
  
 0.833
GCA_000716715_06245
Unannotated protein.
  
     0.765
GCA_000716715_09215
Unannotated protein.
  
     0.755
GCA_000716715_08074
Unannotated protein.
   
 0.735
GCA_000716715_05398
Unannotated protein.
   
 0.691
GCA_000716715_05003
Unannotated protein.
   
 
  0.690
Your Current Organism:
Dactylosporangium aurantiacum
NCBI taxonomy Id: 35754
Other names: ATCC 23491, D. aurantiacum, DSM 43157, IFO 12592, JCM 3083, NBRC 12592, NRRL B-8018, NRRL B-8111, VKM Ac-654
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.