Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKE40665.1 | AKE40666.1 | UL82_02200 | UL82_02205 | Inner membrane protein YhjD. | Hypothetical protein. | 0.683 |
AKE40666.1 | AKE40665.1 | UL82_02205 | UL82_02200 | Hypothetical protein. | Inner membrane protein YhjD. | 0.683 |
AKE40666.1 | AKE40964.1 | UL82_02205 | UL82_03785 | Hypothetical protein. | Inosine-uridine nucleoside N-ribohydrolase. | 0.907 |
AKE40666.1 | AKE41435.1 | UL82_02205 | UL82_06350 | Hypothetical protein. | Inosine-uridine nucleoside N-ribohydrolase. | 0.907 |
AKE40666.1 | AKE42097.1 | UL82_02205 | UL82_09800 | Hypothetical protein. | 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase; Belongs to the 5'-nucleotidase family. | 0.909 |
AKE40666.1 | apt | UL82_02205 | UL82_05825 | Hypothetical protein. | PRPP-binding protein, adenine/guanine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.634 |
AKE40666.1 | deoA | UL82_02205 | UL82_04790 | Hypothetical protein. | Pyrimidine-nucleoside phosphorylase. | 0.582 |
AKE40666.1 | deoD | UL82_02205 | UL82_04430 | Hypothetical protein. | Purine-nucleoside phosphorylase, DeoD family. | 0.907 |
AKE40666.1 | guaA | UL82_02205 | UL82_02050 | Hypothetical protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.592 |
AKE40666.1 | map | UL82_02205 | UL82_06475 | Hypothetical protein. | Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.648 |
AKE40666.1 | tyrS | UL82_02205 | UL82_04800 | Hypothetical protein. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.617 |
AKE40964.1 | AKE40666.1 | UL82_03785 | UL82_02205 | Inosine-uridine nucleoside N-ribohydrolase. | Hypothetical protein. | 0.907 |
AKE40964.1 | AKE41435.1 | UL82_03785 | UL82_06350 | Inosine-uridine nucleoside N-ribohydrolase. | Inosine-uridine nucleoside N-ribohydrolase. | 0.921 |
AKE40964.1 | AKE42097.1 | UL82_03785 | UL82_09800 | Inosine-uridine nucleoside N-ribohydrolase. | 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase; Belongs to the 5'-nucleotidase family. | 0.904 |
AKE40964.1 | apt | UL82_03785 | UL82_05825 | Inosine-uridine nucleoside N-ribohydrolase. | PRPP-binding protein, adenine/guanine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.923 |
AKE40964.1 | deoD | UL82_03785 | UL82_04430 | Inosine-uridine nucleoside N-ribohydrolase. | Purine-nucleoside phosphorylase, DeoD family. | 0.900 |
AKE41435.1 | AKE40666.1 | UL82_06350 | UL82_02205 | Inosine-uridine nucleoside N-ribohydrolase. | Hypothetical protein. | 0.907 |
AKE41435.1 | AKE40964.1 | UL82_06350 | UL82_03785 | Inosine-uridine nucleoside N-ribohydrolase. | Inosine-uridine nucleoside N-ribohydrolase. | 0.921 |
AKE41435.1 | AKE42097.1 | UL82_06350 | UL82_09800 | Inosine-uridine nucleoside N-ribohydrolase. | 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase; Belongs to the 5'-nucleotidase family. | 0.904 |
AKE41435.1 | apt | UL82_06350 | UL82_05825 | Inosine-uridine nucleoside N-ribohydrolase. | PRPP-binding protein, adenine/guanine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.923 |
page 1 of 3