STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtrBSignal transduction histidine kinase. (497 aa)    
Predicted Functional Partners:
mtrA
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain.
 0.999
mprA
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain.
 
 0.938
regX3
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain.
 
 0.933
tcrX
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain.
 
 0.920
lpqB
Sporulation/spore germination protein.
 
    0.885
odhA
2-oxoglutarate dehydrogenase, E1 component.
  
 0.871
echA6
enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.835
aceF
2-oxoglutarate dehydrogenase E2 component.
    
 0.799
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.797
AKE40266.1
ABC-type sugar transport system, periplasmic component.
    
 
 0.753
Your Current Organism:
Corynebacterium kutscheri
NCBI taxonomy Id: 35755
Other names: ATCC 15677, Bacillus pesudotuberculosis murium, Bacterium kutscheri, C. kutscheri, CCUG 27535, CIP 103423, Corynebacterium murium, DSM 20755, IFO 15288, JCM 9385, NBRC 15288, NCTC 11138
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.