Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKE40729.1 | ppa | UL82_02520 | UL82_02540 | Polyphosphate kinase 2, PA0141 family. | Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.909 |
| AKE40729.1 | ppk2A | UL82_02520 | UL82_08280 | Polyphosphate kinase 2, PA0141 family. | Polyphosphate kinase 2, PA0141 family. | 0.906 |
| AKE41814.1 | AKE41815.1 | UL82_08285 | UL82_08290 | Hypothetical protein. | ATPase component of ABC transporters with duplicated ATPase domain. | 0.714 |
| AKE41814.1 | AKE41818.1 | UL82_08285 | UL82_08305 | Hypothetical protein. | Hypothetical protein; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.576 |
| AKE41814.1 | ispE | UL82_08285 | UL82_08295 | Hypothetical protein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.714 |
| AKE41814.1 | ppk2A | UL82_08285 | UL82_08280 | Hypothetical protein. | Polyphosphate kinase 2, PA0141 family. | 0.747 |
| AKE41814.1 | rsmA | UL82_08285 | UL82_08300 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.714 |
| AKE41815.1 | AKE41814.1 | UL82_08290 | UL82_08285 | ATPase component of ABC transporters with duplicated ATPase domain. | Hypothetical protein. | 0.714 |
| AKE41815.1 | AKE41818.1 | UL82_08290 | UL82_08305 | ATPase component of ABC transporters with duplicated ATPase domain. | Hypothetical protein; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.726 |
| AKE41815.1 | ispE | UL82_08290 | UL82_08295 | ATPase component of ABC transporters with duplicated ATPase domain. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.859 |
| AKE41815.1 | ppk2A | UL82_08290 | UL82_08280 | ATPase component of ABC transporters with duplicated ATPase domain. | Polyphosphate kinase 2, PA0141 family. | 0.646 |
| AKE41815.1 | rsmA | UL82_08290 | UL82_08300 | ATPase component of ABC transporters with duplicated ATPase domain. | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.904 |
| AKE41818.1 | AKE41814.1 | UL82_08305 | UL82_08285 | Hypothetical protein; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | Hypothetical protein. | 0.576 |
| AKE41818.1 | AKE41815.1 | UL82_08305 | UL82_08290 | Hypothetical protein; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | ATPase component of ABC transporters with duplicated ATPase domain. | 0.726 |
| AKE41818.1 | ispE | UL82_08305 | UL82_08295 | Hypothetical protein; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.757 |
| AKE41818.1 | ppk2A | UL82_08305 | UL82_08280 | Hypothetical protein; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | Polyphosphate kinase 2, PA0141 family. | 0.540 |
| AKE41818.1 | rsmA | UL82_08305 | UL82_08300 | Hypothetical protein; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.957 |
| ispE | AKE41814.1 | UL82_08295 | UL82_08285 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Hypothetical protein. | 0.714 |
| ispE | AKE41815.1 | UL82_08295 | UL82_08290 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | ATPase component of ABC transporters with duplicated ATPase domain. | 0.859 |
| ispE | AKE41818.1 | UL82_08295 | UL82_08305 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Hypothetical protein; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). | 0.757 |
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