STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
suhB_1Unannotated protein. (176 aa)    
Predicted Functional Partners:
impA
Unannotated protein.
  
  
  0.900
suhB_2
Unannotated protein; Belongs to the inositol monophosphatase superfamily.
  
  
 
0.875
ino1
Unannotated protein.
   
 
 0.833
HisN
Unannotated protein.
 
  
0.802
GCA_001044155_00512
Unannotated protein.
       0.773
cysQ
Unannotated protein.
 
  
 0.709
nusA
Unannotated protein; Participates in both transcription termination and antitermination.
   
   0.701
prfB
Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.700
rpoZ
Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.678
ftsE
Unannotated protein; Part of the ABC transporter FtsEX involved in cellular division.
  
  
 0.660
Your Current Organism:
Corynebacterium pilosum
NCBI taxonomy Id: 35756
Other names: ATCC 29592, C. pilosum, CCUG 27193, CIP 103422, DSM 20521, IFO 15285, JCM 3714, NBRC 15285, NCTC 11862
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.