Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001044155_01430 | GCA_001044155_01431 | GCA_001044155_01430 | GCA_001044155_01431 | Unannotated protein. | Unannotated protein. | 0.911 |
GCA_001044155_01430 | rplU | GCA_001044155_01430 | GCA_001044155_01884 | Unannotated protein. | Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.776 |
GCA_001044155_01430 | rpmC | GCA_001044155_01430 | GCA_001044155_00888 | Unannotated protein. | Unannotated protein; Belongs to the universal ribosomal protein uL29 family. | 0.782 |
GCA_001044155_01430 | rpmD | GCA_001044155_01430 | GCA_001044155_00911 | Unannotated protein. | Unannotated protein. | 0.794 |
GCA_001044155_01430 | rpmE2 | GCA_001044155_01430 | GCA_001044155_02777 | Unannotated protein. | Unannotated protein. | 0.794 |
GCA_001044155_01430 | rpmF | GCA_001044155_01430 | GCA_001044155_02778 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.828 |
GCA_001044155_01430 | rpsC | GCA_001044155_01430 | GCA_001044155_00886 | Unannotated protein. | Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.774 |
GCA_001044155_01430 | rpsN | GCA_001044155_01430 | GCA_001044155_02774 | Unannotated protein. | Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.795 |
GCA_001044155_01430 | rpsO | GCA_001044155_01430 | GCA_001044155_02682 | Unannotated protein. | Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.774 |
GCA_001044155_01430 | yheS_1 | GCA_001044155_01430 | GCA_001044155_01429 | Unannotated protein. | Unannotated protein. | 0.918 |
GCA_001044155_01431 | GCA_001044155_01430 | GCA_001044155_01431 | GCA_001044155_01430 | Unannotated protein. | Unannotated protein. | 0.911 |
GCA_001044155_01431 | rplU | GCA_001044155_01431 | GCA_001044155_01884 | Unannotated protein. | Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.776 |
GCA_001044155_01431 | rpmC | GCA_001044155_01431 | GCA_001044155_00888 | Unannotated protein. | Unannotated protein; Belongs to the universal ribosomal protein uL29 family. | 0.782 |
GCA_001044155_01431 | rpmD | GCA_001044155_01431 | GCA_001044155_00911 | Unannotated protein. | Unannotated protein. | 0.765 |
GCA_001044155_01431 | rpmE2 | GCA_001044155_01431 | GCA_001044155_02777 | Unannotated protein. | Unannotated protein. | 0.755 |
GCA_001044155_01431 | rpmF | GCA_001044155_01431 | GCA_001044155_02778 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.765 |
GCA_001044155_01431 | rpsC | GCA_001044155_01431 | GCA_001044155_00886 | Unannotated protein. | Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.774 |
GCA_001044155_01431 | rpsN | GCA_001044155_01431 | GCA_001044155_02774 | Unannotated protein. | Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.760 |
GCA_001044155_01431 | rpsO | GCA_001044155_01431 | GCA_001044155_02682 | Unannotated protein. | Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.774 |
GCA_001044155_01431 | yheS_1 | GCA_001044155_01431 | GCA_001044155_01429 | Unannotated protein. | Unannotated protein. | 0.952 |
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