Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MurC | divIB | GCA_001044155_01445 | GCA_001044155_01444 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; Essential cell division protein. | 0.984 |
MurC | ftsI | GCA_001044155_01445 | GCA_001044155_01452 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein. | 0.954 |
MurC | ftsW_1 | GCA_001044155_01445 | GCA_001044155_01447 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; Belongs to the SEDS family. | 0.991 |
MurC | mraY | GCA_001044155_01445 | GCA_001044155_01449 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.978 |
MurC | murA | GCA_001044155_01445 | GCA_001044155_00177 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.988 |
MurC | murD | GCA_001044155_01445 | GCA_001044155_01448 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.999 |
MurC | murE | GCA_001044155_01445 | GCA_001044155_01451 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.998 |
MurC | murF | GCA_001044155_01445 | GCA_001044155_01450 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.999 |
MurC | murG | GCA_001044155_01445 | GCA_001044155_01446 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.999 |
divIB | MurC | GCA_001044155_01444 | GCA_001044155_01445 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | 0.984 |
divIB | ftsI | GCA_001044155_01444 | GCA_001044155_01452 | Unannotated protein; Essential cell division protein. | Unannotated protein. | 0.997 |
divIB | ftsW_1 | GCA_001044155_01444 | GCA_001044155_01447 | Unannotated protein; Essential cell division protein. | Unannotated protein; Belongs to the SEDS family. | 0.996 |
divIB | mraY | GCA_001044155_01444 | GCA_001044155_01449 | Unannotated protein; Essential cell division protein. | Unannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.872 |
divIB | murD | GCA_001044155_01444 | GCA_001044155_01448 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.979 |
divIB | murE | GCA_001044155_01444 | GCA_001044155_01451 | Unannotated protein; Essential cell division protein. | Unannotated protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.849 |
divIB | murF | GCA_001044155_01444 | GCA_001044155_01450 | Unannotated protein; Essential cell division protein. | Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.971 |
divIB | murG | GCA_001044155_01444 | GCA_001044155_01446 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.989 |
ftsI | MurC | GCA_001044155_01452 | GCA_001044155_01445 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | 0.954 |
ftsI | divIB | GCA_001044155_01452 | GCA_001044155_01444 | Unannotated protein. | Unannotated protein; Essential cell division protein. | 0.997 |
ftsI | ftsW_1 | GCA_001044155_01452 | GCA_001044155_01447 | Unannotated protein. | Unannotated protein; Belongs to the SEDS family. | 0.998 |
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