STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044155_01652Unannotated protein. (248 aa)    
Predicted Functional Partners:
ppsA
Unannotated protein.
    
 0.897
GCA_001044155_01653
Unannotated protein.
       0.773
thcB
Unannotated protein; Belongs to the cytochrome P450 family.
   
 0.701
GCA_001044155_00567
Unannotated protein.
  
     0.698
rpsA
Unannotated protein.
       0.695
GCA_001044155_01497
Unannotated protein.
     
 0.658
gcvP
Unannotated protein; Belongs to the GcvP family.
     
 0.658
GCA_001044155_02423
Unannotated protein.
 
     0.506
serB_1
Unannotated protein.
   
  0.451
GCA_001044155_02582
Unannotated protein.
  
     0.448
Your Current Organism:
Corynebacterium pilosum
NCBI taxonomy Id: 35756
Other names: ATCC 29592, C. pilosum, CCUG 27193, CIP 103422, DSM 20521, IFO 15285, JCM 3714, NBRC 15285, NCTC 11862
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.