STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044155_01845Unannotated protein. (200 aa)    
Predicted Functional Partners:
BenK
Unannotated protein.
     0.994
cbdB
Unannotated protein.
 
  
 0.656
cbdA
Unannotated protein.
  
 
 0.508
kgtP
Unannotated protein.
  
     0.477
ydcO
Unannotated protein.
 
   
 0.471
clpP2
Unannotated protein; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
       0.454
clpP
Unannotated protein; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
       0.416
GCA_001044155_01864
Unannotated protein.
  
  
  0.402
Your Current Organism:
Corynebacterium pilosum
NCBI taxonomy Id: 35756
Other names: ATCC 29592, C. pilosum, CCUG 27193, CIP 103422, DSM 20521, IFO 15285, JCM 3714, NBRC 15285, NCTC 11862
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.