Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0022Sugars ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (378 aa)    
Predicted Functional Partners:
BCHO_1244
Sugar ABC transporter permease.
 
 0.994
BCHO_0010
MalF-type ABC sugar transport systems permease.
 
 0.990
BCHO_0187
Putative sugar ABC transporter permease.
 
 0.988
BCHO_1271
ABC transporter permease.
 
 0.977
BCHO_1242
Maltose/maltodextrin-binding protein.
  
 0.968
BCHO_1270
Sugars ABC transporter substrate-binding protein.
  
 0.968
BCHO_0009
Sugar ABC transporter permease.
 
 0.967
BCHO_1272
ABC transporter permease.
 
 0.967
BCHO_0564
Sugar ABC transporter permease.
 
 
 0.966
BCHO_1243
Sugar ABC transporter membrane protein.
 
 0.965
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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