Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0035Putative integral membrane protein MviN. (1311 aa)    
Predicted Functional Partners:
BCHO_0033
Phosphohydrolase; Belongs to the Nudix hydrolase family.
       0.855
BCHO_0034
Hypothetical protein.
       0.855
BCHO_0032
RNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.712
BCHO_0792
Putative transporter (sulfate transport family).
  
     0.701
BCHO_0790
Membrane protein.
  
     0.686
BCHO_1348
Type I phosphodiesterase/nucleotide pyrophosphatase.
 
     0.682
BCHO_0633
Thioredoxin.
 
     0.649
BCHO_0121
Forkhead-associated protein.
  
   
 0.618
BCHO_0741
DNA polymerase III subunit delta.
 
  
 0.598
BCHO_1127
Membrane spanning protein.
 
    0.590
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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