BCHO_0047 protein (Bifidobacterium choerinum)

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Score

BCHO_0047

Single-stranded nucleic acid binding R3H domain-containing protein. (180 aa)

Predicted Functional Partners:

BCHO_0048

0.945

BCHO_0303

0.927

BCHO_0049

0.739

rnpA

0.737

BCHO_0922

0.734

rsmG

0.607

rpmH

0.516

lgt

0.506

trpA

0.505

rplP

0.505

Your Current Organism:

Bifidobacterium choerinum

NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCHO_0047	BCHO_0048	BCHO_0047	BCHO_0048	Single-stranded nucleic acid binding R3H domain-containing protein.	Preprotein translocase subunit.	0.945
BCHO_0047	BCHO_0049	BCHO_0047	BCHO_0049	Single-stranded nucleic acid binding R3H domain-containing protein.	Cytosolic protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	0.739
BCHO_0047	BCHO_0303	BCHO_0047	BCHO_0303	Single-stranded nucleic acid binding R3H domain-containing protein.	RNA binding protein; Belongs to the UPF0109 family.	0.927
BCHO_0047	BCHO_0922	BCHO_0047	BCHO_0922	Single-stranded nucleic acid binding R3H domain-containing protein.	Ribonuclease G.	0.734
BCHO_0047	lgt	BCHO_0047	BCHO_1182	Single-stranded nucleic acid binding R3H domain-containing protein.	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.	0.506
BCHO_0047	rnpA	BCHO_0047	BCHO_0050	Single-stranded nucleic acid binding R3H domain-containing protein.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.737
BCHO_0047	rplP	BCHO_0047	BCHO_1454	Single-stranded nucleic acid binding R3H domain-containing protein.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.505
BCHO_0047	rpmH	BCHO_0047	BCHO_0051	Single-stranded nucleic acid binding R3H domain-containing protein.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.516
BCHO_0047	rsmG	BCHO_0047	BCHO_0039	Single-stranded nucleic acid binding R3H domain-containing protein.	16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.607
BCHO_0047	trpA	BCHO_0047	BCHO_1181	Single-stranded nucleic acid binding R3H domain-containing protein.	Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.	0.505
BCHO_0048	BCHO_0047	BCHO_0048	BCHO_0047	Preprotein translocase subunit.	Single-stranded nucleic acid binding R3H domain-containing protein.	0.945
BCHO_0048	BCHO_0049	BCHO_0048	BCHO_0049	Preprotein translocase subunit.	Cytosolic protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	0.952
BCHO_0048	lgt	BCHO_0048	BCHO_1182	Preprotein translocase subunit.	Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.	0.588
BCHO_0048	rnpA	BCHO_0048	BCHO_0050	Preprotein translocase subunit.	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.978
BCHO_0048	rplP	BCHO_0048	BCHO_1454	Preprotein translocase subunit.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.781
BCHO_0048	rpmH	BCHO_0048	BCHO_0051	Preprotein translocase subunit.	50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.936
BCHO_0048	rsmG	BCHO_0048	BCHO_0039	Preprotein translocase subunit.	16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.532
BCHO_0048	trpA	BCHO_0048	BCHO_1181	Preprotein translocase subunit.	Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.	0.625
BCHO_0049	BCHO_0047	BCHO_0049	BCHO_0047	Cytosolic protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Single-stranded nucleic acid binding R3H domain-containing protein.	0.739
BCHO_0049	BCHO_0048	BCHO_0049	BCHO_0048	Cytosolic protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.	Preprotein translocase subunit.	0.952