Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0167Branched chain amino acid ABC transporter substrate-binding protein. (409 aa)    
Predicted Functional Partners:
BCHO_0164
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
BCHO_0163
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
BCHO_0165
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.996
BCHO_0166
Branched-chain amino acid ABC transporter ATPase.
 
 
 0.994
BCHO_1147
Response regulator.
  
 
 0.784
BCHO_1018
Glutamate synthase.
     
 0.563
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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