Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0230Protein PII uridylyltransferase. (606 aa)    
Predicted Functional Partners:
BCHO_0229
Nitrogen regulatory protein N-II; Belongs to the P(II) protein family.
 
 
 0.994
BCHO_0228
Ammonium transporter.
     
 0.824
BCHO_1018
Glutamate synthase.
     
 0.722
BCHO_0226
TetR family transcriptional regulator.
 
   
 0.635
BCHO_1587
Membrane protein.
  
     0.608
BCHO_1120
Glutamine-synthetase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transducti [...]
 
   
 0.579
BCHO_0322
Hypothetical protein.
  
     0.563
BCHO_0244
Septum site determining protein.
  
     0.524
BCHO_0391
Alpha/beta superfamily hydrolase.
  
     0.516
BCHO_0793
Glutamine synthetase.
     
 0.509
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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