Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0282Phospholipid/glycerol acyltransferase. (318 aa)    
Predicted Functional Partners:
gpsA
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.742
BCHO_0940
Membrane protein.
  
     0.698
BCHO_0730
Putative ATP-dependent DNA helicase.
 
   0.687
BCHO_0374
ATPase.
 
     0.680
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.670
BCHO_0346
UDP-N-acetylmuramyl-tripeptide synthetase.
 
     0.657
BCHO_0275
Phosphohydrolase.
  
     0.650
BCHO_0985
Tfp pilus assembly protein.
  
     0.648
BCHO_0261
Pre-pilin peptidase.
 
 
 0.633
BCHO_1365
Acyltransferase.
  
     0.629
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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