Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCHO_0422Type VII secretion system target protein; Belongs to the WXG100 family. (97 aa)    
Predicted Functional Partners:
BCHO_1376
DNA translocase FtsK.
  
 
 0.891
BCHO_0435
Esterase/lipase.
  
     0.755
BCHO_1631
Aminoglycoside phosphotransferase.
  
     0.754
BCHO_0986
Superfamily I DNA and RNA helicase.
  
     0.734
BCHO_0421
Membrane associated protein.
 
   
 0.714
BCHO_0241
Thymidine phosphorylase.
  
     0.655
BCHO_0419
Sensor histidine kinase.
 
   
 0.632
BCHO_1581
Orotate phosphoribosyltransferase.
  
     0.620
crgA
Putative septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
  
     0.615
BCHO_1625
Cell division protein DivIVA.
  
     0.604
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.