Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0440Hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. (67 aa)    
Predicted Functional Partners:
BCHO_0439
Proteasome-associated protein.
 
     0.890
BCHO_0441
Inositol monophosphatase.
       0.706
BCHO_0442
Proteasome-associated protein.
 
     0.690
BCHO_0443
ATPase AAA.
 
     0.652
BCHO_0444
Putative membrane protein.
       0.527
BCHO_1296
Glutamine amidotransferase, class-II.
  
     0.496
crgA
Putative septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
  
     0.437
BCHO_1632
ATP-binding protein.
  
     0.428
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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