Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0619Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family. (444 aa)    
Predicted Functional Partners:
BCHO_0617
oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family.
 
 
 0.933
BCHO_1335
Formate acetyltransferase.
     
 0.808
BCHO_0101
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
     
  0.800
BCHO_0618
Receptor.
 
    0.800
BCHO_1553
Transposase.
  
  
 0.582
BCHO_1503
Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
  
     0.476
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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