Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0633Thioredoxin. (315 aa)    
Predicted Functional Partners:
BCHO_0632
Hypothetical protein.
 
     0.812
BCHO_0631
GTPase regulator-like protein.
 
     0.797
BCHO_1102
Thioredoxin reductase-like protein.
  
 
 0.796
BCHO_0036
Thioredoxin reductase.
  
 
 0.764
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.762
atpH
ATP synthase F0F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
 
    0.717
BCHO_0955
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.701
BCHO_0035
Putative integral membrane protein MviN.
 
     0.649
BCHO_1018
Glutamate synthase.
   
 
 0.570
BCHO_0792
Putative transporter (sulfate transport family).
  
     0.561
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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