Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0634Adenylate cyclase. (207 aa)    
Predicted Functional Partners:
BCHO_1344
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
  0.900
BCHO_1379
(p)ppGpp synthetase.
     
  0.900
BCHO_1490
Anaerobic ribonucleoside-triphosphate reductase.
     
  0.900
BCHO_1419
Hypothetical protein.
  
     0.746
BCHO_1409
Dipeptidylaminopeptidase/acylaminoacyl- peptidase.
  
     0.744
BCHO_0719
Hypothetical protein.
  
     0.686
BCHO_0437
Membrane protein.
  
     0.666
BCHO_0632
Hypothetical protein.
  
   
 0.662
BCHO_0391
Alpha/beta superfamily hydrolase.
  
     0.640
BCHO_0631
GTPase regulator-like protein.
  
   
 0.629
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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