Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0636Glucan endo-1,6-beta-glucosidase; Belongs to the glycosyl hydrolase 30 family. (496 aa)    
Predicted Functional Partners:
BCHO_0305
Beta-galactosidase P1.
  
 
 0.908
BCHO_0635
Translation initiation inhibitor protein.
  
    0.528
BCHO_0063
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
  
 0.512
BCHO_1477
Endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.496
argS
arginyl-tRNA synthetase.
       0.469
BCHO_1280
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.455
BCHO_1279
alpha-L-fucosidase.
  
    0.453
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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