STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrBHomoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (328 aa)    
Predicted Functional Partners:
BCHO_0639
Homoserine dehydrogenase.
 
 0.999
BCHO_0757
Threonine synthase.
 
 0.999
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
 
    
 0.879
metE
5-methyltetrahydropteroyltriglutamate/ homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
   
 
 0.861
BCHO_0517
Cystathionine gamma-synthase.
  
 
 0.847
BCHO_1024
Branched-chain amino acid aminotransferase.
  
 
 0.846
BCHO_0519
Cystathionine beta-synthase.
     
 0.844
BCHO_1234
Bifunctional beta-cystathionase/maltose regulon repressor.
   
 0.831
BCHO_1678
Serine dehydratase.
  
 
 0.825
BCHO_0571
O-acetylhomoserine (thiol)-lyase.
    
  0.807
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.