Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_0656Serine O-acetyltransferase. (188 aa)    
Predicted Functional Partners:
BCHO_0519
Cystathionine beta-synthase.
  
 
 0.845
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.823
BCHO_0657
Membrane protein.
       0.788
BCHO_0658
Glycosyltransferase family 1.
  
  
 0.762
BCHO_0659
Capsular polysaccharide biosynthesis protein.
  
  
 0.762
BCHO_0660
Capsular polysaccharide biosynthesis protein.
  
  
 0.672
BCHO_1018
Glutamate synthase.
     
 0.557
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.538
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
     
 0.514
BCHO_0517
Cystathionine gamma-synthase.
  
  
 0.474
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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