Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCHO_0006 | BCHO_0465 | BCHO_0006 | BCHO_0465 | Threonine dehydratase. | Low specificity-threonine aldolase. | 0.916 |
BCHO_0006 | BCHO_0639 | BCHO_0006 | BCHO_0639 | Threonine dehydratase. | Homoserine dehydrogenase. | 0.622 |
BCHO_0006 | BCHO_0757 | BCHO_0006 | BCHO_0757 | Threonine dehydratase. | Threonine synthase. | 0.952 |
BCHO_0006 | BCHO_1018 | BCHO_0006 | BCHO_1018 | Threonine dehydratase. | Glutamate synthase. | 0.829 |
BCHO_0006 | thrB | BCHO_0006 | BCHO_0640 | Threonine dehydratase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.506 |
BCHO_0465 | BCHO_0006 | BCHO_0465 | BCHO_0006 | Low specificity-threonine aldolase. | Threonine dehydratase. | 0.916 |
BCHO_0465 | BCHO_0757 | BCHO_0465 | BCHO_0757 | Low specificity-threonine aldolase. | Threonine synthase. | 0.934 |
BCHO_0465 | BCHO_1018 | BCHO_0465 | BCHO_1018 | Low specificity-threonine aldolase. | Glutamate synthase. | 0.491 |
BCHO_0639 | BCHO_0006 | BCHO_0639 | BCHO_0006 | Homoserine dehydrogenase. | Threonine dehydratase. | 0.622 |
BCHO_0639 | BCHO_0757 | BCHO_0639 | BCHO_0757 | Homoserine dehydrogenase. | Threonine synthase. | 0.964 |
BCHO_0639 | BCHO_1018 | BCHO_0639 | BCHO_1018 | Homoserine dehydrogenase. | Glutamate synthase. | 0.767 |
BCHO_0639 | BCHO_1388 | BCHO_0639 | BCHO_1388 | Homoserine dehydrogenase. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.427 |
BCHO_0639 | thrB | BCHO_0639 | BCHO_0640 | Homoserine dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
BCHO_0755 | BCHO_0757 | BCHO_0755 | BCHO_0757 | Phosphoribosylglycinamide synthetase. | Threonine synthase. | 0.701 |
BCHO_0755 | nadD | BCHO_0755 | BCHO_0754 | Phosphoribosylglycinamide synthetase. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.858 |
BCHO_0755 | proA | BCHO_0755 | BCHO_0756 | Phosphoribosylglycinamide synthetase. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.858 |
BCHO_0755 | prs | BCHO_0755 | BCHO_0753 | Phosphoribosylglycinamide synthetase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.735 |
BCHO_0757 | BCHO_0006 | BCHO_0757 | BCHO_0006 | Threonine synthase. | Threonine dehydratase. | 0.952 |
BCHO_0757 | BCHO_0465 | BCHO_0757 | BCHO_0465 | Threonine synthase. | Low specificity-threonine aldolase. | 0.934 |
BCHO_0757 | BCHO_0639 | BCHO_0757 | BCHO_0639 | Threonine synthase. | Homoserine dehydrogenase. | 0.964 |
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