Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BCHO_0787Signal transduction histidine kinase. (398 aa)    
Predicted Functional Partners:
BCHO_0788
Hypothetical protein.
       0.723
BCHO_0789
Peptidase family M20A protein.
       0.582
BCHO_1411
Putative TetR-family transcriptional regulator.
  
    0.529
BCHO_1406
Response regulator of two-component system.
 
 
 0.476
BCHO_0785
Two component transcriptional regulator, LuxR family.
 
 
 0.474
BCHO_1621
Response regulator of two-component system.
 
 
 0.465
BCHO_1405
Histidine kinase sensor of two component system.
 
  
 0.404
BCHO_0790
Membrane protein.
       0.400
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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