Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
BCHO_0901Cell division protein. (228 aa)    
Predicted Functional Partners:
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.784
BCHO_0903
Hypothetical protein.
       0.672
BCHO_1127
Membrane spanning protein.
  
     0.671
BCHO_0900
Nucleic acid-binding protein.
       0.664
BCHO_1155
Periplasmic-binding protein domain protein.
  
     0.659
BCHO_1553
Transposase.
  
  
 0.643
BCHO_0346
UDP-N-acetylmuramyl-tripeptide synthetase.
 
     0.634
BCHO_1419
Hypothetical protein.
  
     0.599
BCHO_0940
Membrane protein.
  
     0.594
BCHO_0968
Cell division protein.
 
     0.587
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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