Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCHO_10044-alpha-glucanotransferase. (722 aa)    
Predicted Functional Partners:
BCHO_1151
Glycogen operon protein GlgX; Belongs to the glycosyl hydrolase 13 family.
 
 0.989
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.977
BCHO_0614
Trehalose-6-phosphate hydrolase.
 
 
 0.958
BCHO_0107
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 
 0.954
BCHO_1048
Pullulanase.
 
 
 0.949
BCHO_1051
Pullulanase.
  
 
 0.942
BCHO_1241
Glycosylase.
  
 
 0.931
BCHO_1245
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.925
BCHO_1415
Phosphoglucomutase.
  
 
 0.916
BCHO_0007
Oligo-1,6-glucosidase.
  
 
 0.912
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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