BCHO_1560 protein (Bifidobacterium choerinum)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

BCHO_1560

Crp/Fnr family transcriptional regulator. (216 aa)

Predicted Functional Partners:

BCHO_0799

0.999

BCHO_1559

0.924

BCHO_1558

0.907

BCHO_1557

0.874

rpoB

0.723

rpoC

0.678

rpoZ

0.658

BCHO_1018

0.652

BCHO_1556

0.641

rpoA

0.611

Your Current Organism:

Bifidobacterium choerinum

NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCHO_0799	BCHO_1018	BCHO_0799	BCHO_1018	Hypothetical protein.	Glutamate synthase.	0.634
BCHO_0799	BCHO_1560	BCHO_0799	BCHO_1560	Hypothetical protein.	Crp/Fnr family transcriptional regulator.	0.999
BCHO_0799	rpoA	BCHO_0799	BCHO_1435	Hypothetical protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.718
BCHO_0799	rpoB	BCHO_0799	BCHO_0720	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BCHO_0799	rpoC	BCHO_0799	BCHO_0721	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BCHO_0799	rpoZ	BCHO_0799	BCHO_0450	Hypothetical protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
BCHO_1018	BCHO_0799	BCHO_1018	BCHO_0799	Glutamate synthase.	Hypothetical protein.	0.634
BCHO_1018	BCHO_1560	BCHO_1018	BCHO_1560	Glutamate synthase.	Crp/Fnr family transcriptional regulator.	0.652
BCHO_1018	rpoB	BCHO_1018	BCHO_0720	Glutamate synthase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.691
BCHO_1018	rpoC	BCHO_1018	BCHO_0721	Glutamate synthase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.700
BCHO_1556	BCHO_1557	BCHO_1556	BCHO_1557	Hypothetical protein.	HAD family hydrolase.	0.611
BCHO_1556	BCHO_1558	BCHO_1556	BCHO_1558	Hypothetical protein.	Putative metal binding protein (Probable copper chaperone CopZ).	0.654
BCHO_1556	BCHO_1560	BCHO_1556	BCHO_1560	Hypothetical protein.	Crp/Fnr family transcriptional regulator.	0.641
BCHO_1557	BCHO_1556	BCHO_1557	BCHO_1556	HAD family hydrolase.	Hypothetical protein.	0.611
BCHO_1557	BCHO_1558	BCHO_1557	BCHO_1558	HAD family hydrolase.	Putative metal binding protein (Probable copper chaperone CopZ).	0.981
BCHO_1557	BCHO_1559	BCHO_1557	BCHO_1559	HAD family hydrolase.	Hypothetical protein.	0.874
BCHO_1557	BCHO_1560	BCHO_1557	BCHO_1560	HAD family hydrolase.	Crp/Fnr family transcriptional regulator.	0.874
BCHO_1558	BCHO_1556	BCHO_1558	BCHO_1556	Putative metal binding protein (Probable copper chaperone CopZ).	Hypothetical protein.	0.654
BCHO_1558	BCHO_1557	BCHO_1558	BCHO_1557	Putative metal binding protein (Probable copper chaperone CopZ).	HAD family hydrolase.	0.981
BCHO_1558	BCHO_1559	BCHO_1558	BCHO_1559	Putative metal binding protein (Probable copper chaperone CopZ).	Hypothetical protein.	0.914