Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCHO_1685Alpha-1,4-glucosidase. (586 aa)    
Predicted Functional Partners:
BCHO_1241
Glycosylase.
 
  
 
0.931
BCHO_0007
Oligo-1,6-glucosidase.
  
  
 
0.924
BCHO_0383
Beta-(1-2)-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.922
BCHO_1048
Pullulanase.
  
 
  0.918
BCHO_0013
Alpha-galactosidase.
  
 
 0.913
BCHO_0183
Bifunctional beta-D-glucosidase/beta-D-fucosidase.
  
 
 0.913
BCHO_0193
Alpha-galactosidase.
  
 
 0.913
BCHO_1004
4-alpha-glucanotransferase.
  
 
 0.912
BCHO_1679
4-alpha-glucanotransferase.
  
 
 0.912
BCHO_1293
Alpha-galactosidase.
  
 
 0.910
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
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