Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCHO_1697Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (914 aa)    
Predicted Functional Partners:
BCHO_1698
Putative S-layer y domain protein.
 
  
0.506
BCHO_1242
Maltose/maltodextrin-binding protein.
 
  
 0.477
BCHO_1243
Sugar ABC transporter membrane protein.
 
    0.476
BCHO_1244
Sugar ABC transporter permease.
 
  
 0.435
BCHO_1048
Pullulanase.
 
   
0.428
BCHO_1245
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
    0.425
BCHO_1051
Pullulanase.
 
   
0.400
Your Current Organism:
Bifidobacterium choerinum
NCBI taxonomy Id: 35760
Other names: ATCC 27686, B. choerinum, CIP 103378, DSM 20434, LMG 10510, LMG:10510, strain SU806
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.