STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696485_00096Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_001696485_04989
Unannotated protein.
    
 0.981
GCA_001696485_04455
Unannotated protein.
    
  0.979
GCA_001696485_02028
Unannotated protein.
   
  
 0.898
GCA_001696485_06201
Unannotated protein.
   
 
 0.889
GCA_001696485_06213
Unannotated protein.
   
 
 0.889
GCA_001696485_06994
Unannotated protein.
   
 
 0.887
GCA_001696485_01739
Unannotated protein.
   
 
 0.886
GCA_001696485_03622
Unannotated protein.
   
 
 0.886
GCA_001696485_04748
Unannotated protein.
   
 
 0.886
GCA_001696485_06211
Unannotated protein.
   
 
 0.886
Your Current Organism:
Planobispora rosea
NCBI taxonomy Id: 35762
Other names: ATCC 23866, DSM 43051, IFO 15558, JCM 3166, NBRC 15558, NRRL B-8121, P. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.