STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696485_00107Unannotated protein. (357 aa)    
Predicted Functional Partners:
GCA_001696485_04863
Unannotated protein.
  
  
  0.629
GCA_001696485_03130
Unannotated protein.
  
     0.616
GCA_001696485_04948
Unannotated protein.
  
     0.594
GCA_001696485_01394
Unannotated protein.
  
    0.572
GCA_001696485_03078
Unannotated protein.
  
     0.538
GCA_001696485_01896
Unannotated protein.
  
     0.535
GCA_001696485_00791
Unannotated protein.
  
     0.533
GCA_001696485_04089
Unannotated protein.
  
     0.526
GCA_001696485_07128
Unannotated protein.
  
  
  0.489
GCA_001696485_03486
Unannotated protein.
  
     0.481
Your Current Organism:
Planobispora rosea
NCBI taxonomy Id: 35762
Other names: ATCC 23866, DSM 43051, IFO 15558, JCM 3166, NBRC 15558, NRRL B-8121, P. rosea
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.