STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696485_03005Unannotated protein. (569 aa)    
Predicted Functional Partners:
GCA_001696485_06343
Unannotated protein.
 0.999
GCA_001696485_06342
Unannotated protein.
 
 
 0.983
GCA_001696485_06307
Unannotated protein.
 
 
 0.932
GCA_001696485_06329
Unannotated protein.
 0.916
GCA_001696485_06308
Unannotated protein.
 
 
 0.911
GCA_001696485_01296
Unannotated protein.
  
    0.902
GCA_001696485_05782
Unannotated protein.
 
 0.887
GCA_001696485_01236
Unannotated protein.
  
 
 0.878
GCA_001696485_05501
Unannotated protein.
  
 
 0.878
GCA_001696485_04959
Unannotated protein.
  
 
 0.871
Your Current Organism:
Planobispora rosea
NCBI taxonomy Id: 35762
Other names: ATCC 23866, DSM 43051, IFO 15558, JCM 3166, NBRC 15558, NRRL B-8121, P. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.