STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696485_03353Unannotated protein. (132 aa)    
Predicted Functional Partners:
GCA_001696485_03352
Unannotated protein.
 
    0.713
GCA_001696485_03351
Unannotated protein.
       0.654
GCA_001696485_06331
Unannotated protein.
    
  0.619
GCA_001696485_00234
Unannotated protein.
  
     0.533
GCA_001696485_03940
Unannotated protein.
  
 
  0.530
GCA_001696485_01658
Unannotated protein.
 
    0.508
GCA_001696485_05966
Unannotated protein.
 
 
  0.501
GCA_001696485_03354
Unannotated protein.
       0.436
GCA_001696485_06408
Unannotated protein.
  
  
  0.432
GCA_001696485_02144
Unannotated protein.
  
     0.427
Your Current Organism:
Planobispora rosea
NCBI taxonomy Id: 35762
Other names: ATCC 23866, DSM 43051, IFO 15558, JCM 3166, NBRC 15558, NRRL B-8121, P. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.