STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696485_06976Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_001696485_02742
Unannotated protein.
  
  
 0.812
GCA_001696485_06975
Unannotated protein.
       0.732
GCA_001696485_02732
Unannotated protein.
 
   
 0.502
GCA_001696485_06977
Unannotated protein.
       0.498
GCA_001696485_02737
Unannotated protein.
 
   
 0.495
GCA_001696485_02739
Unannotated protein.
 
     0.480
GCA_001696485_02736
Unannotated protein.
 
   
 0.473
GCA_001696485_02749
Unannotated protein.
 
    0.453
GCA_001696485_00875
Unannotated protein.
 
     0.451
GCA_001696485_02738
Unannotated protein.
  
  
 0.400
Your Current Organism:
Planobispora rosea
NCBI taxonomy Id: 35762
Other names: ATCC 23866, DSM 43051, IFO 15558, JCM 3166, NBRC 15558, NRRL B-8121, P. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.