STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_01919Uncharacterized protein. (671 aa)    
Predicted Functional Partners:
CBER1_05083
Uncharacterized protein.
    
 0.889
CBER1_02962
Nudix hydrolase domain-containing protein.
   
 0.762
CBER1_02602
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.632
CBER1_03882
Uncharacterized protein.
  
 0.629
CBER1_02665
Phosphodiesterase.
    
 0.617
CBER1_05460
Nucleoside diphosphate kinase.
     
 0.615
CBER1_04843
Uncharacterized protein.
  
 0.613
CBER1_00350
Uncharacterized protein.
    
 0.606
CBER1_01942
A_deaminase domain-containing protein.
   
 
 0.593
CBER1_00510
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.590
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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