STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_01912Glycosidase; Belongs to the glycosyl hydrolase 16 family. (402 aa)    
Predicted Functional Partners:
CBER1_08541
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.892
CBER1_04717
Uncharacterized protein.
    
 0.767
CBER1_06491
Uncharacterized protein.
    
 0.767
CBER1_10954
Uncharacterized protein.
    
 0.767
CBER1_11280
Uncharacterized protein.
    
 0.767
CBER1_02725
Uncharacterized protein.
    
 0.767
CBER1_03936
Uncharacterized protein.
    
 0.767
CBER1_00753
BZIP domain-containing protein.
     
 0.766
CBER1_10778
Uncharacterized protein.
     
 0.762
CBER1_04754
Histone H3; Belongs to the histone H3 family.
    
 0.759
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.