STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_06775Uncharacterized protein. (1510 aa)    
Predicted Functional Partners:
CBER1_03684
Ubiquitin carboxyl-terminal hydrolase.
    
  0.711
CBER1_08807
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.683
CBER1_05573
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.657
CBER1_05200
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.649
CBER1_09512
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.637
CBER1_00661
Uncharacterized protein.
    
  0.630
CBER1_01291
ENTH domain-containing protein.
    
 0.623
CBER1_10139
USP domain-containing protein.
    
  0.618
CBER1_01197
WD_REPEATS_REGION domain-containing protein.
    
  0.611
CBER1_06443
Uncharacterized protein.
    
  0.577
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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