STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_04846Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
CBER1_04052
Histidine biosynthesis trifunctional protein.
  
 
 0.995
CBER1_07361
Aminotran_1_2 domain-containing protein.
  
 
 0.981
CBER1_08434
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
  
 
 0.968
CBER1_11746
Uncharacterized protein.
  
 
 0.937
CBER1_02753
BRCT domain-containing protein.
    
 0.874
CBER1_09611
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.
  
  
 0.863
CBER1_10606
DNA ligase.
   
 0.856
CBER1_01758
Uncharacterized protein.
  
  
 0.832
CBER1_08127
DNA_LIGASE_A3 domain-containing protein.
   
 0.831
CBER1_11003
BRCT domain-containing protein.
    
 0.818
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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