STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_06988PKS_ER domain-containing protein. (381 aa)    
Predicted Functional Partners:
CBER1_09434
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.923
CBER1_01243
Fe-ADH domain-containing protein.
    
 0.908
CBER1_02354
Fe-ADH domain-containing protein.
    
 0.779
CBER1_02199
Uncharacterized protein.
    
 0.657
CBER1_10160
Uncharacterized protein.
     
 0.621
CBER1_11088
Uncharacterized protein.
     
 0.621
CBER1_00250
Uncharacterized protein.
   
 0.596
CBER1_06151
2Fe-2S ferredoxin-type domain-containing protein.
    
 0.545
CBER1_08640
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.542
CBER1_09874
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.542
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.