Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBER1_00710 | CBER1_01842 | A0A2S6C971 | A0A2S6CA26 | Brix domain-containing protein. | Uncharacterized protein. | 0.920 |
CBER1_00710 | CBER1_05089 | A0A2S6C971 | A0A2S6CNK7 | Brix domain-containing protein. | Uncharacterized protein. | 0.959 |
CBER1_00710 | CBER1_05470 | A0A2S6C971 | A0A2S6C9K8 | Brix domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.991 |
CBER1_00710 | CBER1_05965 | A0A2S6C971 | A0A2S6CAN8 | Brix domain-containing protein. | Brix domain-containing protein. | 0.957 |
CBER1_00710 | CBER1_08217 | A0A2S6C971 | A0A2S6CGF1 | Brix domain-containing protein. | RRM domain-containing protein. | 0.997 |
CBER1_00710 | CBER1_08760 | A0A2S6C971 | A0A2S6BW47 | Brix domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.965 |
CBER1_00710 | CBER1_10197 | A0A2S6C971 | A0A2S6C6H9 | Brix domain-containing protein. | Uncharacterized protein. | 0.944 |
CBER1_00710 | ERB1 | A0A2S6C971 | A0A2S6C1A8 | Brix domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.990 |
CBER1_00710 | NOP7 | A0A2S6C971 | A0A2S6C8T8 | Brix domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
CBER1_00710 | YTM1 | A0A2S6C971 | A0A2S6CBU8 | Brix domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.989 |
CBER1_01842 | CBER1_00710 | A0A2S6CA26 | A0A2S6C971 | Uncharacterized protein. | Brix domain-containing protein. | 0.920 |
CBER1_01842 | CBER1_05470 | A0A2S6CA26 | A0A2S6C9K8 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.944 |
CBER1_01842 | CBER1_05965 | A0A2S6CA26 | A0A2S6CAN8 | Uncharacterized protein. | Brix domain-containing protein. | 0.944 |
CBER1_01842 | CBER1_08217 | A0A2S6CA26 | A0A2S6CGF1 | Uncharacterized protein. | RRM domain-containing protein. | 0.973 |
CBER1_01842 | CBER1_08760 | A0A2S6CA26 | A0A2S6BW47 | Uncharacterized protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.962 |
CBER1_01842 | CBER1_10197 | A0A2S6CA26 | A0A2S6C6H9 | Uncharacterized protein. | Uncharacterized protein. | 0.903 |
CBER1_01842 | ERB1 | A0A2S6CA26 | A0A2S6C1A8 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.869 |
CBER1_01842 | NOP7 | A0A2S6CA26 | A0A2S6C8T8 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.929 |
CBER1_01842 | YTM1 | A0A2S6CA26 | A0A2S6CBU8 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.840 |
CBER1_05089 | CBER1_00710 | A0A2S6CNK7 | A0A2S6C971 | Uncharacterized protein. | Brix domain-containing protein. | 0.959 |
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