STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_09060Uncharacterized protein. (2725 aa)    
Predicted Functional Partners:
CBER1_05305
ANK_REP_REGION domain-containing protein.
   
  0.516
CBER1_04473
Uncharacterized protein.
    
  0.454
CBER1_11137
Uncharacterized protein.
    
  0.454
CBER1_06780
MPN domain-containing protein.
    
  0.424
CBER1_00671
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
  0.420
CBER1_01111
MRG domain-containing protein.
    
  0.416
CBER1_05015
Nsp1_C domain-containing protein.
    
  0.412
CBER1_06577
Uncharacterized protein.
    
  0.412
CBER1_07954
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.408
CBER1_10003
Uncharacterized protein.
    
  0.408
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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