STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_10518Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
CBER1_08220
PKS_AT domain-containing protein.
  
 0.554
CBER1_04770
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.547
CBER1_06151
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.542
CBER1_05373
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.542
CBER1_06664
Uncharacterized protein.
   
  0.476
CBER1_00314
TPR_REGION domain-containing protein.
    
  0.446
CBER1_02097
Uncharacterized protein.
    
 0.442
CBER1_03778
Uncharacterized protein.
   
  0.437
CBER1_11287
Uncharacterized protein.
   
  0.437
CBER1_10284
Uncharacterized protein.
   
  0.437
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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