STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_10649DJ-1_PfpI domain-containing protein. (248 aa)    
Predicted Functional Partners:
CBER1_07808
Uncharacterized protein.
   
 0.959
CBER1_00819
Uncharacterized protein.
   
 0.856
CBER1_08530
Uncharacterized protein.
   
 0.762
CBER1_08169
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.762
CBER1_04539
BZIP domain-containing protein.
   
 0.762
CBER1_02701
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.761
CBER1_05246
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.744
CBER1_11121
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.744
CBER1_07126
Uncharacterized protein.
   
 0.744
CBER1_04811
Uncharacterized protein.
   
 0.744
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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