STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_10218Uncharacterized protein. (352 aa)    
Predicted Functional Partners:
CBER1_02975
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.902
CBER1_01427
zf-RING-like domain-containing protein.
    
 0.900
CBER1_10644
SMC_N domain-containing protein.
    
 0.873
CBER1_01238
SP-RING-type domain-containing protein.
    
 0.871
CBER1_04714
Uncharacterized protein.
    
 0.824
CBER1_00169
SMC_N domain-containing protein.
    
 0.824
CBER1_02939
Structural maintenance of chromosomes protein.
    
 0.730
CBER1_11485
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.640
CBER1_11048
Structural maintenance of chromosomes protein.
    
 0.602
CBER1_10974
Uncharacterized protein.
    
 0.602
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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