Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBER1_00169 | CBER1_01238 | A0A2S6CD93 | A0A2S6CIW0 | SMC_N domain-containing protein. | SP-RING-type domain-containing protein. | 0.999 |
CBER1_00169 | CBER1_01427 | A0A2S6CD93 | A0A2S6CCC1 | SMC_N domain-containing protein. | zf-RING-like domain-containing protein. | 0.999 |
CBER1_00169 | CBER1_02939 | A0A2S6CD93 | A0A2S6C2S0 | SMC_N domain-containing protein. | Structural maintenance of chromosomes protein. | 0.937 |
CBER1_00169 | CBER1_02975 | A0A2S6CD93 | A0A2S6C2U1 | SMC_N domain-containing protein. | Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | 0.999 |
CBER1_00169 | CBER1_10218 | A0A2S6CD93 | A0A2S6BXZ5 | SMC_N domain-containing protein. | Uncharacterized protein. | 0.824 |
CBER1_00169 | CBER1_10644 | A0A2S6CD93 | A0A2S6CJE1 | SMC_N domain-containing protein. | SMC_N domain-containing protein. | 0.999 |
CBER1_00169 | CBER1_10974 | A0A2S6CD93 | A0A2S6BZB9 | SMC_N domain-containing protein. | Uncharacterized protein. | 0.782 |
CBER1_00169 | CBER1_11048 | A0A2S6CD93 | A0A2S6BYS0 | SMC_N domain-containing protein. | Structural maintenance of chromosomes protein. | 0.782 |
CBER1_00169 | CBER1_11485 | A0A2S6CD93 | A0A2S6CL02 | SMC_N domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.819 |
CBER1_01238 | CBER1_00169 | A0A2S6CIW0 | A0A2S6CD93 | SP-RING-type domain-containing protein. | SMC_N domain-containing protein. | 0.999 |
CBER1_01238 | CBER1_01427 | A0A2S6CIW0 | A0A2S6CCC1 | SP-RING-type domain-containing protein. | zf-RING-like domain-containing protein. | 0.999 |
CBER1_01238 | CBER1_02939 | A0A2S6CIW0 | A0A2S6C2S0 | SP-RING-type domain-containing protein. | Structural maintenance of chromosomes protein. | 0.903 |
CBER1_01238 | CBER1_02975 | A0A2S6CIW0 | A0A2S6C2U1 | SP-RING-type domain-containing protein. | Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | 0.999 |
CBER1_01238 | CBER1_04714 | A0A2S6CIW0 | A0A2S6BRA7 | SP-RING-type domain-containing protein. | Uncharacterized protein. | 0.971 |
CBER1_01238 | CBER1_10218 | A0A2S6CIW0 | A0A2S6BXZ5 | SP-RING-type domain-containing protein. | Uncharacterized protein. | 0.871 |
CBER1_01238 | CBER1_10644 | A0A2S6CIW0 | A0A2S6CJE1 | SP-RING-type domain-containing protein. | SMC_N domain-containing protein. | 0.999 |
CBER1_01238 | CBER1_10974 | A0A2S6CIW0 | A0A2S6BZB9 | SP-RING-type domain-containing protein. | Uncharacterized protein. | 0.868 |
CBER1_01238 | CBER1_11048 | A0A2S6CIW0 | A0A2S6BYS0 | SP-RING-type domain-containing protein. | Structural maintenance of chromosomes protein. | 0.868 |
CBER1_01238 | CBER1_11485 | A0A2S6CIW0 | A0A2S6CL02 | SP-RING-type domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.961 |
CBER1_01427 | CBER1_00169 | A0A2S6CCC1 | A0A2S6CD93 | zf-RING-like domain-containing protein. | SMC_N domain-containing protein. | 0.999 |
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