STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_10827Uncharacterized protein; Belongs to the AAA ATPase family. (492 aa)    
Predicted Functional Partners:
CBER1_06601
PHB domain-containing protein.
   
 0.696
CBER1_00306
PHB domain-containing protein.
   
 0.696
CBER1_00329
Prohibitin.
   
 0.696
CBER1_07628
Prohibitin.
   
 0.696
CBER1_00524
Uncharacterized protein.
   
 0.691
CBER1_06855
Uncharacterized protein.
  
 
 0.662
CBER1_07528
Uncharacterized protein.
  
 
 0.656
CBER1_09367
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
   0.647
CBER1_10662
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.642
CBER1_10899
Uncharacterized protein.
   
   0.636
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.