Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_11017Tudor domain-containing protein. (300 aa)    
Predicted Functional Partners:
CBER1_01996
SF3b1 domain-containing protein.
   
 0.971
CBER1_02751
Matrin-type domain-containing protein.
    
  0.965
CBER1_06397
PSP domain-containing protein.
   
 0.961
CBER1_10772
Uncharacterized protein.
    
 
 0.941
CBER1_09159
CID domain-containing protein.
    
 0.930
CBER1_06451
Uncharacterized protein.
    
 0.913
CBER1_07913
Matrin-type domain-containing protein.
   
 0.911
CBER1_06861
Uncharacterized protein.
   
 0.893
CBER1_09007
Uncharacterized protein.
    
 0.888
CBER1_04350
Uncharacterized protein.
   
  0.882
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.