STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_11458FSH1 domain-containing protein. (386 aa)    
Predicted Functional Partners:
CBER1_05885
Flavoprotein domain-containing protein.
  
 
 0.972
CBER1_10911
Thymidylat_synt domain-containing protein.
  
 
 0.961
CBER1_09867
Uncharacterized protein.
  
 
 0.891
CBER1_01898
Flavoprotein domain-containing protein.
  
 
 0.876
CBER1_10207
Thymidylate_kin domain-containing protein.
    
 0.858
CBER1_06616
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.857
CBER1_10519
Formyl_trans_N domain-containing protein.
    
 0.857
CBER1_00221
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.857
CBER1_05690
Uncharacterized protein.
    
 0.841
CBER1_07002
MGS domain-containing protein.
    
 0.841
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.